STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neil3Endonuclease VIII-like 3. (606 aa)    
Predicted Functional Partners:
Nthl1
Endonuclease III-like protein 1 isoform X1.
   
  
 0.880
Ogg1
N-glycosylase/DNA lyase isoform X1.
      
 0.732
Coasy
Phosphopantetheine adenylyltransferase / dephospho-CoA kinase.
  
  
 0.729
Dcakd
Dephospho-CoA kinase domain-containing protein.
  
  
 0.729
Fen1
Flap endonuclease 1.
  
  
 0.718
Mutyh
Adenine DNA glycosylase isoform X1.
  
  
 0.652
Dlgap5
Disks large-associated protein 5.
   
    0.621
Aldh18a1
Delta-1-pyrroline-5-carboxylate synthase isoform X1.
     
 0.584
Ybey
Putative ribonuclease isoform X1.
  
  
 0.581
Srpr
Signal recognition particle receptor subunit alpha isoform X1.
  
  
 0.576
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.