STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Anxa10Annexin A10 isoform X1. (324 aa)    
Predicted Functional Partners:
Matn1
Cartilage matrix protein.
   
 0.552
Edc3
Enhancer of mRNA-decapping protein 3.
   
   0.539
Ccdc14
Coiled-coil domain-containing protein 14.
    
 0.475
Vsig1
V-set and immunoglobulin domain containing 1.
   
  
 0.418
Trio
Triple functional domain protein.
   
 0.414
Kalrn
Kalirin isoform X1.
   
 0.414
Tmem88b
Transmembrane protein 88B.
      
 0.414
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.