STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sema3dSemaphorin-3D. (777 aa)    
Predicted Functional Partners:
Nrp1
Neuropilin-1 isoform X1.
    
 0.985
Plxna3
Plexin-A3 isoform X1.
    
 0.782
Plxnd1
Plexin-D1.
    
 0.746
Plxna1
Plexin-A1.
    
 0.734
Nrp2
Neuropilin-2 isoform X1.
    
 
 0.722
Plxna4
Plexin-A4.
    
 0.627
Mst1r
Macrophage-stimulating protein receptor isoform X1.
    
 0.610
Met
Proto-oncogene tyrosine-protein kinase Met.
    
 0.610
Tbx18
T-box transcription factor TBX18.
      
 0.504
Scx
Basic helix-loop-helix transcription factor scleraxis.
      
 0.502
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.