Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cdhr5 | Lhfpl3 | MGP_PahariEiJ_P0019956 | MGP_PahariEiJ_P0048300 | Cadherin related family member 5. | Lipoma HMGIC fusion partner-like 3 protein isoform X1. | 0.589 |
Cib2 | Lhfpl3 | MGP_PahariEiJ_P0023555 | MGP_PahariEiJ_P0048300 | Calcium and integrin-binding family member 2 isoform X1. | Lipoma HMGIC fusion partner-like 3 protein isoform X1. | 0.555 |
Cib2 | Pcdh15 | MGP_PahariEiJ_P0023555 | MGP_PahariEiJ_P0086515 | Calcium and integrin-binding family member 2 isoform X1. | Protocadherin-15 isoform X1. | 0.732 |
Cib2 | Tmc1 | MGP_PahariEiJ_P0023555 | MGP_PahariEiJ_P0021348 | Calcium and integrin-binding family member 2 isoform X1. | Transmembrane channel-like protein 1. | 0.984 |
Cib2 | Tmc2 | MGP_PahariEiJ_P0023555 | MGP_PahariEiJ_P0065554 | Calcium and integrin-binding family member 2 isoform X1. | Transmembrane channel-like protein 2. | 0.873 |
Cib2 | Tmc3 | MGP_PahariEiJ_P0023555 | MGP_PahariEiJ_P0017375 | Calcium and integrin-binding family member 2 isoform X1. | Transmembrane channel-like protein 3 isoform X1. | 0.806 |
Cib2 | Tmie | MGP_PahariEiJ_P0023555 | MGP_PahariEiJ_P0026008 | Calcium and integrin-binding family member 2 isoform X1. | Transmembrane inner ear expressed protein. | 0.850 |
Cib3 | Lhfpl3 | MGP_PahariEiJ_P0047859 | MGP_PahariEiJ_P0048300 | Calcium and integrin-binding family member 3 isoform X1. | Lipoma HMGIC fusion partner-like 3 protein isoform X1. | 0.448 |
Cib3 | Tmc1 | MGP_PahariEiJ_P0047859 | MGP_PahariEiJ_P0021348 | Calcium and integrin-binding family member 3 isoform X1. | Transmembrane channel-like protein 1. | 0.818 |
Cib3 | Tmc2 | MGP_PahariEiJ_P0047859 | MGP_PahariEiJ_P0065554 | Calcium and integrin-binding family member 3 isoform X1. | Transmembrane channel-like protein 2. | 0.741 |
Cib3 | Tmc3 | MGP_PahariEiJ_P0047859 | MGP_PahariEiJ_P0017375 | Calcium and integrin-binding family member 3 isoform X1. | Transmembrane channel-like protein 3 isoform X1. | 0.746 |
Cib3 | Tmie | MGP_PahariEiJ_P0047859 | MGP_PahariEiJ_P0026008 | Calcium and integrin-binding family member 3 isoform X1. | Transmembrane inner ear expressed protein. | 0.501 |
Lhfpl3 | Cdhr5 | MGP_PahariEiJ_P0048300 | MGP_PahariEiJ_P0019956 | Lipoma HMGIC fusion partner-like 3 protein isoform X1. | Cadherin related family member 5. | 0.589 |
Lhfpl3 | Cib2 | MGP_PahariEiJ_P0048300 | MGP_PahariEiJ_P0023555 | Lipoma HMGIC fusion partner-like 3 protein isoform X1. | Calcium and integrin-binding family member 2 isoform X1. | 0.555 |
Lhfpl3 | Cib3 | MGP_PahariEiJ_P0048300 | MGP_PahariEiJ_P0047859 | Lipoma HMGIC fusion partner-like 3 protein isoform X1. | Calcium and integrin-binding family member 3 isoform X1. | 0.448 |
Lhfpl3 | Nlgn2 | MGP_PahariEiJ_P0048300 | MGP_PahariEiJ_P0034382 | Lipoma HMGIC fusion partner-like 3 protein isoform X1. | Neuroligin-2 isoform X1. | 0.490 |
Lhfpl3 | Pcdh15 | MGP_PahariEiJ_P0048300 | MGP_PahariEiJ_P0086515 | Lipoma HMGIC fusion partner-like 3 protein isoform X1. | Protocadherin-15 isoform X1. | 0.606 |
Lhfpl3 | Slc44a5 | MGP_PahariEiJ_P0048300 | MGP_PahariEiJ_P0072078 | Lipoma HMGIC fusion partner-like 3 protein isoform X1. | Solute carrier family 44 (choline transporter-like protein), member 2/4/5. | 0.408 |
Lhfpl3 | Tmc1 | MGP_PahariEiJ_P0048300 | MGP_PahariEiJ_P0021348 | Lipoma HMGIC fusion partner-like 3 protein isoform X1. | Transmembrane channel-like protein 1. | 0.441 |
Lhfpl3 | Tmc2 | MGP_PahariEiJ_P0048300 | MGP_PahariEiJ_P0065554 | Lipoma HMGIC fusion partner-like 3 protein isoform X1. | Transmembrane channel-like protein 2. | 0.488 |
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