STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asic3Acid-sensing ion channel 3 isoform X1. (530 aa)    
Predicted Functional Partners:
Trpv1
Transient receptor potential cation channel subfamily V member 1 isoform X1.
      
 0.717
Stoml3
Erythrocyte band 7 integral membrane protein.
    
 0.690
Stom
Erythrocyte band 7 integral membrane protein isoform X1.
    
 0.674
P2rx3
P2X purinoceptor 3.
      
 0.626
Asic1
Acid sensing ion channel subunit 1.
  
 
0.616
Scn10a
Sodium channel protein type 10 subunit alpha isoform X1.
     
 0.610
Stoml1
Stomatin-like protein 1 isoform X1.
    
 0.578
Asic4
LOW QUALITY PROTEIN: acid-sensing ion channel 4.
  
   
0.563
Trpa1
Transient receptor potential cation channel subfamily A member 1 isoform X1.
      
 0.560
Scn11a
Sodium channel protein type 11 subunit alpha.
     
 0.556
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.