Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Huwe1 | MGP_PahariEiJ_P0020720 | MGP_PahariEiJ_P0090668 | MGP_PahariEiJ_P0020720 | E3 ubiquitin-protein ligase HUWE1. | annotation not available | 0.622 |
Huwe1 | MGP_PahariEiJ_P0020721 | MGP_PahariEiJ_P0090668 | MGP_PahariEiJ_P0020721 | E3 ubiquitin-protein ligase HUWE1. | annotation not available | 0.622 |
Huwe1 | Trip12 | MGP_PahariEiJ_P0090668 | MGP_PahariEiJ_P0074027 | E3 ubiquitin-protein ligase HUWE1. | E3 ubiquitin-protein ligase TRIP12 isoform X1. | 0.715 |
Huwe1 | Uba3 | MGP_PahariEiJ_P0090668 | MGP_PahariEiJ_P0051350 | E3 ubiquitin-protein ligase HUWE1. | NEDD8-activating enzyme E1 catalytic subunit isoform X1. | 0.454 |
Huwe1 | Ube2d1 | MGP_PahariEiJ_P0090668 | MGP_PahariEiJ_P0086493 | E3 ubiquitin-protein ligase HUWE1. | Ubiquitin-conjugating enzyme E2 D1. | 0.608 |
Huwe1 | Ube3c | MGP_PahariEiJ_P0090668 | MGP_PahariEiJ_P0048537 | E3 ubiquitin-protein ligase HUWE1. | Ubiquitin-protein ligase E3 C. | 0.512 |
Ltn1 | Trip12 | MGP_PahariEiJ_P0029481 | MGP_PahariEiJ_P0074027 | E3 ubiquitin-protein ligase listerin. | E3 ubiquitin-protein ligase TRIP12 isoform X1. | 0.796 |
Ltn1 | Uba3 | MGP_PahariEiJ_P0029481 | MGP_PahariEiJ_P0051350 | E3 ubiquitin-protein ligase listerin. | NEDD8-activating enzyme E1 catalytic subunit isoform X1. | 0.483 |
Ltn1 | Ube3c | MGP_PahariEiJ_P0029481 | MGP_PahariEiJ_P0048537 | E3 ubiquitin-protein ligase listerin. | Ubiquitin-protein ligase E3 C. | 0.574 |
MGP_PahariEiJ_P0020720 | Huwe1 | MGP_PahariEiJ_P0020720 | MGP_PahariEiJ_P0090668 | annotation not available | E3 ubiquitin-protein ligase HUWE1. | 0.622 |
MGP_PahariEiJ_P0020720 | MGP_PahariEiJ_P0020721 | MGP_PahariEiJ_P0020720 | MGP_PahariEiJ_P0020721 | annotation not available | annotation not available | 0.984 |
MGP_PahariEiJ_P0020720 | Psmd14 | MGP_PahariEiJ_P0020720 | MGP_PahariEiJ_P0062940 | annotation not available | 26S proteasome non-ATPase regulatory subunit 14. | 0.809 |
MGP_PahariEiJ_P0020720 | Trip12 | MGP_PahariEiJ_P0020720 | MGP_PahariEiJ_P0074027 | annotation not available | E3 ubiquitin-protein ligase TRIP12 isoform X1. | 0.837 |
MGP_PahariEiJ_P0020720 | Uba3 | MGP_PahariEiJ_P0020720 | MGP_PahariEiJ_P0051350 | annotation not available | NEDD8-activating enzyme E1 catalytic subunit isoform X1. | 0.626 |
MGP_PahariEiJ_P0020720 | Ube2d1 | MGP_PahariEiJ_P0020720 | MGP_PahariEiJ_P0086493 | annotation not available | Ubiquitin-conjugating enzyme E2 D1. | 0.479 |
MGP_PahariEiJ_P0020720 | Ube3c | MGP_PahariEiJ_P0020720 | MGP_PahariEiJ_P0048537 | annotation not available | Ubiquitin-protein ligase E3 C. | 0.504 |
MGP_PahariEiJ_P0020720 | Usp14 | MGP_PahariEiJ_P0020720 | MGP_PahariEiJ_P0038630 | annotation not available | Ubiquitin carboxyl-terminal hydrolase 14 isoform X1. | 0.581 |
MGP_PahariEiJ_P0020721 | Huwe1 | MGP_PahariEiJ_P0020721 | MGP_PahariEiJ_P0090668 | annotation not available | E3 ubiquitin-protein ligase HUWE1. | 0.622 |
MGP_PahariEiJ_P0020721 | MGP_PahariEiJ_P0020720 | MGP_PahariEiJ_P0020721 | MGP_PahariEiJ_P0020720 | annotation not available | annotation not available | 0.984 |
MGP_PahariEiJ_P0020721 | Psmd14 | MGP_PahariEiJ_P0020721 | MGP_PahariEiJ_P0062940 | annotation not available | 26S proteasome non-ATPase regulatory subunit 14. | 0.809 |
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