STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nrf1Nuclear respiratory factor 1 isoform X1. (534 aa)    
Predicted Functional Partners:
Ppargc1a
Alpha peroxisome proliferator-activated receptor gamma coactivator 1-alpha.
   
 0.995
Ppargc1b
Peroxisome proliferator-activated receptor gamma coactivator 1-beta isoform X1.
     
 0.973
Tfam
Transcription factor A, mitochondrial.
     
 0.774
Foxo3
Forkhead box protein O3.
      
 0.749
Sirt1
NAD-dependent protein deacetylase sirtuin-1 isoform X1.
    
 
 0.675
Esrra
Estrogen-related receptor alpha.
     
 0.656
Cyct
Cytochrome c, testis-specific.
     
 0.581
Sirt7
NAD+-dependent protein deacetylase sirtuin 7.
    
 
 0.580
Rbm22
Pre-mRNA-splicing factor RBM22/SLT11.
   
 0.565
Pparg
Peroxisome proliferator-activated receptor gamma isoform X1.
     
 0.565
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.