STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpa4Carboxypeptidase A4 isoform X1. (420 aa)    
Predicted Functional Partners:
Lxn
Latexin.
    
 
 0.714
Cela2a
Chymotrypsin-like elastase family member 2A.
   
 
 0.653
Ctrc
Chymotrypsin C.
   
 
 0.652
Ppy
Pancreatic polypeptide.
   
  
 0.543
Agbl2
Cytosolic carboxypeptidase protein 2/3.
      
 0.476
Cela1
Chymotrypsin-like elastase family member 1.
   
 
 0.452
Ctrl
Chymotrypsin-like protease CTRL-1.
   
 
 0.411
Cel
Bile salt-activated lipase isoform X1.
   
  
 0.403
Copg2
Coatomer subunit gamma-2 isoform X1.
      
 0.400
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.