Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F2r | F2rl3 | MGP_PahariEiJ_P0026840 | MGP_PahariEiJ_P0047891 | Coagulation factor II (thrombin) receptor. | Coagulation factor II (thrombin) receptor-like 3. | 0.927 |
F2r | LOC110316497 | MGP_PahariEiJ_P0026840 | MGP_PahariEiJ_P0049558 | Coagulation factor II (thrombin) receptor. | Trypsin-4. | 0.741 |
F2rl1 | LOC110316497 | MGP_PahariEiJ_P0026839 | MGP_PahariEiJ_P0049558 | Coagulation factor II (thrombin) receptor-like 1. | Trypsin-4. | 0.744 |
F2rl2 | F2rl3 | MGP_PahariEiJ_P0026842 | MGP_PahariEiJ_P0047891 | Coagulation factor II (thrombin) receptor-like 2. | Coagulation factor II (thrombin) receptor-like 3. | 0.978 |
F2rl2 | LOC110316497 | MGP_PahariEiJ_P0026842 | MGP_PahariEiJ_P0049558 | Coagulation factor II (thrombin) receptor-like 2. | Trypsin-4. | 0.678 |
F2rl3 | F2r | MGP_PahariEiJ_P0047891 | MGP_PahariEiJ_P0026840 | Coagulation factor II (thrombin) receptor-like 3. | Coagulation factor II (thrombin) receptor. | 0.927 |
F2rl3 | F2rl2 | MGP_PahariEiJ_P0047891 | MGP_PahariEiJ_P0026842 | Coagulation factor II (thrombin) receptor-like 3. | Coagulation factor II (thrombin) receptor-like 2. | 0.978 |
F2rl3 | LOC110316497 | MGP_PahariEiJ_P0047891 | MGP_PahariEiJ_P0049558 | Coagulation factor II (thrombin) receptor-like 3. | Trypsin-4. | 0.725 |
LOC110316497 | F2r | MGP_PahariEiJ_P0049558 | MGP_PahariEiJ_P0026840 | Trypsin-4. | Coagulation factor II (thrombin) receptor. | 0.741 |
LOC110316497 | F2rl1 | MGP_PahariEiJ_P0049558 | MGP_PahariEiJ_P0026839 | Trypsin-4. | Coagulation factor II (thrombin) receptor-like 1. | 0.744 |
LOC110316497 | F2rl2 | MGP_PahariEiJ_P0049558 | MGP_PahariEiJ_P0026842 | Trypsin-4. | Coagulation factor II (thrombin) receptor-like 2. | 0.678 |
LOC110316497 | F2rl3 | MGP_PahariEiJ_P0049558 | MGP_PahariEiJ_P0047891 | Trypsin-4. | Coagulation factor II (thrombin) receptor-like 3. | 0.725 |
LOC110316497 | Met | MGP_PahariEiJ_P0049558 | MGP_PahariEiJ_P0048812 | Trypsin-4. | Proto-oncogene tyrosine-protein kinase Met. | 0.492 |
LOC110316497 | Mst1r | MGP_PahariEiJ_P0049558 | MGP_PahariEiJ_P0025481 | Trypsin-4. | Macrophage-stimulating protein receptor isoform X1. | 0.492 |
LOC110316497 | Pard3 | MGP_PahariEiJ_P0049558 | MGP_PahariEiJ_P0054825 | Trypsin-4. | Partitioning defective 3 homolog isoform X1. | 0.650 |
LOC110316497 | Spink1 | MGP_PahariEiJ_P0049558 | MGP_PahariEiJ_P0039227 | Trypsin-4. | Serine protease inhibitor Kazal-type 1. | 0.473 |
Met | LOC110316497 | MGP_PahariEiJ_P0048812 | MGP_PahariEiJ_P0049558 | Proto-oncogene tyrosine-protein kinase Met. | Trypsin-4. | 0.492 |
Met | Mst1r | MGP_PahariEiJ_P0048812 | MGP_PahariEiJ_P0025481 | Proto-oncogene tyrosine-protein kinase Met. | Macrophage-stimulating protein receptor isoform X1. | 0.728 |
Mst1r | LOC110316497 | MGP_PahariEiJ_P0025481 | MGP_PahariEiJ_P0049558 | Macrophage-stimulating protein receptor isoform X1. | Trypsin-4. | 0.492 |
Mst1r | Met | MGP_PahariEiJ_P0025481 | MGP_PahariEiJ_P0048812 | Macrophage-stimulating protein receptor isoform X1. | Proto-oncogene tyrosine-protein kinase Met. | 0.728 |
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