STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arhgef5Rho guanine nucleotide exchange factor 5. (1581 aa)    
Predicted Functional Partners:
Rock1
Rho-associated protein kinase 1.
    
 0.517
Rhog
Rho-related GTP-binding protein RhoG.
    
 0.512
Garem1
GRB2-associated and regulator of MAPK protein 1 isoform X1.
    
 
 0.503
Dtna
Dystrobrevin alpha.
      
 0.495
Cdc42
Cell division control protein 42 homolog isoform X1.
    
 0.485
Rhoa
Transforming protein RhoA isoform X1.
    
 0.442
Coro6
Coronin-6 isoform X1.
      
 0.437
Dusp22
Dual specificity protein phosphatase 22 isoform X1.
      
 0.420
Ptpn20
Tyrosine-protein phosphatase non-receptor type 20 isoform X1.
      
 0.405
Fam72a
Protein FAM72A isoform X1.
      
 0.403
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.