STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmem176bTransmembrane protein 176B. (263 aa)    
Predicted Functional Partners:
Tmem176a
Transmembrane protein 176A.
  
 
0.937
Mtrex
Superkiller viralicidic activity 2-like 2.
   
 0.652
Tent4a
Non-canonical poly(A) RNA polymerase PAPD7 isoform X1.
   
 0.516
Tent4b
Non-canonical poly(A) RNA polymerase PAPD5 isoform X1.
   
 0.516
Ms4a18
Membrane-spanning 4-domains subfamily A member 3/4/8/12/15/18.
      
 0.476
Skiv2l
Antiviral helicase SKI2.
   
 0.421
Vsig4
V-set and immunoglobulin domain-containing protein 4.
  
  
 0.412
Trp53tg5
TP53-target gene 5 protein.
  
     0.410
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.