STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nap1l5Nucleosome assembly protein 1-like 5. (154 aa)    
Predicted Functional Partners:
Zrsr1
U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1.
    
 
 0.656
Rps6
Small subunit ribosomal protein S6e.
   
 
 0.651
H2az2
Histone H2A.V isoform X1.
   
 
 0.639
LOC110319859
Histone H2A.Z.
   
 
 0.639
Nnat
Neuronatin.
      
 0.591
Ndn
Necdin.
   
 
 0.578
Plagl1
Zinc finger protein PLAGL1 isoform X1.
    
 
 0.573
Herc3
Probable E3 ubiquitin-protein ligase HERC3 isoform X1.
      
 0.569
Shisa4
Protein shisa-4.
   
 
 0.563
Ipo9
Importin-9.
   
 
 0.563
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.