STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
4930544G11RikRIKEN cDNA 4930544G11 gene. (193 aa)    
Predicted Functional Partners:
Itsn2
Intersectin-2.
    
 0.964
Itsn1
Intersectin-1 isoform X1.
    
 0.884
Rock1
Rho-associated protein kinase 1.
   
 0.822
Arhgap35
Glucocorticoid receptor DNA-binding factor 1.
    
 0.801
Arhgef28
Rho guanine nucleotide exchange factor 28 isoform X1.
   
 0.784
Arhgap1
Rho GTPase-activating protein 1 isoform X1.
    
 0.779
Arhgef12
Rho guanine nucleotide exchange factor 12.
   
 0.775
Anln
Actin-binding protein anillin.
   
 0.773
Rock2
Rho-associated protein kinase 2.
   
 0.771
Myo9b
Unconventional myosin-IXb isoform X1.
    
 0.767
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.