Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Clp1 | Rpp38 | MGP_PahariEiJ_P0063627 | MGP_PahariEiJ_P0039887 | Polyribonucleotide 5'-hydroxyl-kinase Clp1 isoform X1. | Ribonucleases P/MRP protein subunit RPP38. | 0.773 |
Clp1 | Tsen15 | MGP_PahariEiJ_P0063627 | MGP_PahariEiJ_P0075634 | Polyribonucleotide 5'-hydroxyl-kinase Clp1 isoform X1. | TRNA-splicing endonuclease subunit Sen15 isoform X1. | 0.834 |
Clp1 | Tsen2 | MGP_PahariEiJ_P0063627 | MGP_PahariEiJ_P0051766 | Polyribonucleotide 5'-hydroxyl-kinase Clp1 isoform X1. | TRNA-splicing endonuclease subunit Sen2. | 0.853 |
Clp1 | Tsen34 | MGP_PahariEiJ_P0063627 | MGP_PahariEiJ_P0045467 | Polyribonucleotide 5'-hydroxyl-kinase Clp1 isoform X1. | TRNA-splicing endonuclease subunit Sen34 isoform X1. | 0.791 |
Clp1 | Tsen54 | MGP_PahariEiJ_P0063627 | MGP_PahariEiJ_P0037726 | Polyribonucleotide 5'-hydroxyl-kinase Clp1 isoform X1. | TRNA-splicing endonuclease subunit Sen54. | 0.809 |
Fnbp1 | Trip10 | MGP_PahariEiJ_P0061945 | MGP_PahariEiJ_P0044926 | Formin-binding protein 1 isoform X1. | Thyroid hormone receptor interactor 10. | 0.409 |
Fnbp1 | Tsen2 | MGP_PahariEiJ_P0061945 | MGP_PahariEiJ_P0051766 | Formin-binding protein 1 isoform X1. | TRNA-splicing endonuclease subunit Sen2. | 0.689 |
Fnbp1l | Tsen2 | MGP_PahariEiJ_P0071228 | MGP_PahariEiJ_P0051766 | Formin-binding protein 1-like. | TRNA-splicing endonuclease subunit Sen2. | 0.689 |
Rpp25 | Rpp38 | MGP_PahariEiJ_P0023681 | MGP_PahariEiJ_P0039887 | Ribonucleases P/MRP protein subunit RPP25. | Ribonucleases P/MRP protein subunit RPP38. | 0.998 |
Rpp25 | Rpp40 | MGP_PahariEiJ_P0023681 | MGP_PahariEiJ_P0040712 | Ribonucleases P/MRP protein subunit RPP25. | Ribonuclease P protein subunit p40 isoform X1. | 0.991 |
Rpp25 | Tsen2 | MGP_PahariEiJ_P0023681 | MGP_PahariEiJ_P0051766 | Ribonucleases P/MRP protein subunit RPP25. | TRNA-splicing endonuclease subunit Sen2. | 0.661 |
Rpp25 | Tsen34 | MGP_PahariEiJ_P0023681 | MGP_PahariEiJ_P0045467 | Ribonucleases P/MRP protein subunit RPP25. | TRNA-splicing endonuclease subunit Sen34 isoform X1. | 0.602 |
Rpp38 | Clp1 | MGP_PahariEiJ_P0039887 | MGP_PahariEiJ_P0063627 | Ribonucleases P/MRP protein subunit RPP38. | Polyribonucleotide 5'-hydroxyl-kinase Clp1 isoform X1. | 0.773 |
Rpp38 | Rpp25 | MGP_PahariEiJ_P0039887 | MGP_PahariEiJ_P0023681 | Ribonucleases P/MRP protein subunit RPP38. | Ribonucleases P/MRP protein subunit RPP25. | 0.998 |
Rpp38 | Rpp40 | MGP_PahariEiJ_P0039887 | MGP_PahariEiJ_P0040712 | Ribonucleases P/MRP protein subunit RPP38. | Ribonuclease P protein subunit p40 isoform X1. | 0.993 |
Rpp38 | Tsen2 | MGP_PahariEiJ_P0039887 | MGP_PahariEiJ_P0051766 | Ribonucleases P/MRP protein subunit RPP38. | TRNA-splicing endonuclease subunit Sen2. | 0.636 |
Rpp40 | Rpp25 | MGP_PahariEiJ_P0040712 | MGP_PahariEiJ_P0023681 | Ribonuclease P protein subunit p40 isoform X1. | Ribonucleases P/MRP protein subunit RPP25. | 0.991 |
Rpp40 | Rpp38 | MGP_PahariEiJ_P0040712 | MGP_PahariEiJ_P0039887 | Ribonuclease P protein subunit p40 isoform X1. | Ribonucleases P/MRP protein subunit RPP38. | 0.993 |
Rpp40 | Tsen2 | MGP_PahariEiJ_P0040712 | MGP_PahariEiJ_P0051766 | Ribonuclease P protein subunit p40 isoform X1. | TRNA-splicing endonuclease subunit Sen2. | 0.723 |
Rpp40 | Tsen54 | MGP_PahariEiJ_P0040712 | MGP_PahariEiJ_P0037726 | Ribonuclease P protein subunit p40 isoform X1. | TRNA-splicing endonuclease subunit Sen54. | 0.609 |
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