Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Adgrl1 | Lrtm2 | MGP_PahariEiJ_P0053483 | MGP_PahariEiJ_P0051984 | Adhesion G protein-coupled receptor L1 isoform X1. | Leucine-rich repeat and transmembrane domain-containing protein 2. | 0.689 |
Adgrl2 | Lrtm2 | MGP_PahariEiJ_P0071925 | MGP_PahariEiJ_P0051984 | Adhesion G protein-coupled receptor L2. | Leucine-rich repeat and transmembrane domain-containing protein 2. | 0.689 |
Adgrl3 | Lrtm2 | MGP_PahariEiJ_P0031992 | MGP_PahariEiJ_P0051984 | Adhesion G protein-coupled receptor L3 isoform X1. | Leucine-rich repeat and transmembrane domain-containing protein 2. | 0.689 |
Dag1 | Lrtm2 | MGP_PahariEiJ_P0025582 | MGP_PahariEiJ_P0051984 | Dystroglycan 1. | Leucine-rich repeat and transmembrane domain-containing protein 2. | 0.428 |
Lrtm2 | Adgrl1 | MGP_PahariEiJ_P0051984 | MGP_PahariEiJ_P0053483 | Leucine-rich repeat and transmembrane domain-containing protein 2. | Adhesion G protein-coupled receptor L1 isoform X1. | 0.689 |
Lrtm2 | Adgrl2 | MGP_PahariEiJ_P0051984 | MGP_PahariEiJ_P0071925 | Leucine-rich repeat and transmembrane domain-containing protein 2. | Adhesion G protein-coupled receptor L2. | 0.689 |
Lrtm2 | Adgrl3 | MGP_PahariEiJ_P0051984 | MGP_PahariEiJ_P0031992 | Leucine-rich repeat and transmembrane domain-containing protein 2. | Adhesion G protein-coupled receptor L3 isoform X1. | 0.689 |
Lrtm2 | Dag1 | MGP_PahariEiJ_P0051984 | MGP_PahariEiJ_P0025582 | Leucine-rich repeat and transmembrane domain-containing protein 2. | Dystroglycan 1. | 0.428 |
Lrtm2 | Myo9a | MGP_PahariEiJ_P0051984 | MGP_PahariEiJ_P0023815 | Leucine-rich repeat and transmembrane domain-containing protein 2. | Unconventional myosin-IXa. | 0.447 |
Lrtm2 | Myo9b | MGP_PahariEiJ_P0051984 | MGP_PahariEiJ_P0047732 | Leucine-rich repeat and transmembrane domain-containing protein 2. | Unconventional myosin-IXb isoform X1. | 0.447 |
Lrtm2 | Robo1 | MGP_PahariEiJ_P0051984 | MGP_PahariEiJ_P0029404 | Leucine-rich repeat and transmembrane domain-containing protein 2. | Roundabout, axon guidance receptor 1. | 0.617 |
Lrtm2 | Robo2 | MGP_PahariEiJ_P0051984 | MGP_PahariEiJ_P0029405 | Leucine-rich repeat and transmembrane domain-containing protein 2. | Roundabout guidance receptor 2. | 0.617 |
Lrtm2 | Robo4 | MGP_PahariEiJ_P0051984 | MGP_PahariEiJ_P0022940 | Leucine-rich repeat and transmembrane domain-containing protein 2. | Roundabout, axon guidance receptor 4. | 0.617 |
Lrtm2 | Tmem45a2 | MGP_PahariEiJ_P0051984 | MGP_PahariEiJ_P0029274 | Leucine-rich repeat and transmembrane domain-containing protein 2. | Transmembrane protein 45A-like. | 0.479 |
Myo9a | Lrtm2 | MGP_PahariEiJ_P0023815 | MGP_PahariEiJ_P0051984 | Unconventional myosin-IXa. | Leucine-rich repeat and transmembrane domain-containing protein 2. | 0.447 |
Myo9a | Robo1 | MGP_PahariEiJ_P0023815 | MGP_PahariEiJ_P0029404 | Unconventional myosin-IXa. | Roundabout, axon guidance receptor 1. | 0.517 |
Myo9a | Robo2 | MGP_PahariEiJ_P0023815 | MGP_PahariEiJ_P0029405 | Unconventional myosin-IXa. | Roundabout guidance receptor 2. | 0.517 |
Myo9a | Robo4 | MGP_PahariEiJ_P0023815 | MGP_PahariEiJ_P0022940 | Unconventional myosin-IXa. | Roundabout, axon guidance receptor 4. | 0.517 |
Myo9b | Lrtm2 | MGP_PahariEiJ_P0047732 | MGP_PahariEiJ_P0051984 | Unconventional myosin-IXb isoform X1. | Leucine-rich repeat and transmembrane domain-containing protein 2. | 0.447 |
Myo9b | Robo1 | MGP_PahariEiJ_P0047732 | MGP_PahariEiJ_P0029404 | Unconventional myosin-IXb isoform X1. | Roundabout, axon guidance receptor 1. | 0.517 |
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