STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LtbrTumor necrosis factor receptor superfamily member 3 isoform X1. (415 aa)    
Predicted Functional Partners:
Ltb
Lymphotoxin beta (TNF superfamily, member 3).
   
 0.998
Lta
Lymphotoxin alpha (TNF superfamily, member 1).
   
 0.995
Traf3
TNF receptor-associated factor 3 isoform X1.
    
 0.994
Tnfsf14
Tumor necrosis factor ligand superfamily member 14.
   
 0.993
Traf5
TNF receptor-associated factor 5 isoform X1.
    
 0.983
Traf2
TNF receptor-associated factor 2 isoform X1.
    
 0.978
Map3k14
Mitogen-activated protein kinase kinase kinase 14.
   
 0.970
Tnfsf18
Tumor necrosis factor ligand superfamily member 18 isoform X1.
   
 0.854
Cd40lg
Tumor necrosis factor ligand superfamily member 5.
   
 0.854
Tnfrsf13c
Tumor necrosis factor receptor superfamily member 13C isoform X1.
   
 
 0.831
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.