STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Glg1Golgi apparatus protein 1 isoform X1. (1179 aa)    
Predicted Functional Partners:
Sele
Selectin, endothelial cell.
    
 0.989
Selp
Selectin, platelet.
    
 0.855
Selplg
P-selectin glycoprotein ligand 1 isoform X1.
    
 
 0.685
Sell
L-selectin isoform X1.
    
 0.633
Vcam1
Vascular cell adhesion protein 1 isoform X1.
      
 0.587
Spn
Leukosialin.
      
 0.556
Cd44
CD44 antigen isoform X1.
      
 0.552
Ccdc88a
Girdin isoform X1.
   
    0.525
Fam234b
Protein FAM234B isoform X1.
      
 0.478
Aplp2
Amyloid beta (A4) precursor-like protein 2.
   
  
 0.474
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.