STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cntnap4Contactin-associated protein-like 4 isoform X1. (1310 aa)    
Predicted Functional Partners:
Cntn5
Contactin 5.
   
 0.846
Nrcam
Neuronal cell adhesion molecule isoform X1.
   
 0.798
Chl1
Neural cell adhesion molecule L1-like protein isoform X1.
   
 0.670
Cntn1
Contactin 1.
   
 0.668
MGP_PahariEiJ_P0051444
Contactin-4.
   
 0.566
Nfasc
Neurofascin isoform X1.
   
 0.516
Cntn6
Contactin-6 isoform X1.
   
 0.503
Cntn3
Contactin 3.
   
 0.498
Nrxn3
Neurexin 3.
   
  
0.480
Cask
Calcium/calmodulin-dependent serine protein kinase.
   
 
 0.458
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.