STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hsbp1Heat shock factor-binding protein 1. (76 aa)    
Predicted Functional Partners:
Hsf1
Heat shock transcription factor 1.
    
 0.831
Rbx1
E3 ubiquitin-protein ligase RBX1.
   
  
 0.800
Washc3
WASH complex subunit 3 isoform X1.
    
 
 0.764
Hsf4
Heat shock factor protein 4 isoform X1.
    
 0.536
Ireb2
Iron-responsive element-binding protein 2 isoform X1.
      
 0.503
Hsf2
Heat shock factor protein 2 isoform X1.
    
 0.501
Hsf3
Heat shock transcription factor 3.
    
 0.501
Lpcat3
Lysophospholipid acyltransferase 5.
      
 0.485
Nfs1
Cysteine desulfurase, mitochondrial isoform X1.
    
 
 0.483
Hsph1
Heat shock protein 105 kDa isoform X1.
    
 0.477
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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