Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cdc6 | Cdt1 | MGP_PahariEiJ_P0036452 | MGP_PahariEiJ_P0054633 | Cell division control protein 6 homolog. | Chromatin licensing and DNA replication factor 1. | 0.999 |
Cdc6 | Gmnn | MGP_PahariEiJ_P0036452 | MGP_PahariEiJ_P0040535 | Cell division control protein 6 homolog. | Geminin. | 0.828 |
Cdc6 | Mcm2 | MGP_PahariEiJ_P0036452 | MGP_PahariEiJ_P0051097 | Cell division control protein 6 homolog. | DNA replication licensing factor MCM2 isoform X1. | 0.998 |
Cdc6 | Mcm3 | MGP_PahariEiJ_P0036452 | MGP_PahariEiJ_P0072228 | Cell division control protein 6 homolog. | DNA replication licensing factor MCM3. | 0.998 |
Cdc6 | Mcm4 | MGP_PahariEiJ_P0036452 | MGP_PahariEiJ_P0027893 | Cell division control protein 6 homolog. | DNA replication licensing factor MCM4. | 0.998 |
Cdc6 | Mcm5 | MGP_PahariEiJ_P0036452 | MGP_PahariEiJ_P0047909 | Cell division control protein 6 homolog. | DNA replication licensing factor MCM5 isoform X1. | 0.998 |
Cdc6 | Mcm7 | MGP_PahariEiJ_P0036452 | MGP_PahariEiJ_P0059860 | Cell division control protein 6 homolog. | DNA replication licensing factor MCM7. | 0.998 |
Cdc6 | Orc1 | MGP_PahariEiJ_P0036452 | MGP_PahariEiJ_P0078597 | Cell division control protein 6 homolog. | Origin recognition complex subunit 1 isoform X1. | 0.999 |
Cdc6 | Orc3 | MGP_PahariEiJ_P0036452 | MGP_PahariEiJ_P0057372 | Cell division control protein 6 homolog. | Origin recognition complex subunit 3 isoform X1. | 0.999 |
Cdc6 | Orc4 | MGP_PahariEiJ_P0036452 | MGP_PahariEiJ_P0062675 | Cell division control protein 6 homolog. | Origin recognition complex subunit 4. | 0.999 |
Cdt1 | Cdc6 | MGP_PahariEiJ_P0054633 | MGP_PahariEiJ_P0036452 | Chromatin licensing and DNA replication factor 1. | Cell division control protein 6 homolog. | 0.999 |
Cdt1 | Gmnn | MGP_PahariEiJ_P0054633 | MGP_PahariEiJ_P0040535 | Chromatin licensing and DNA replication factor 1. | Geminin. | 0.999 |
Cdt1 | Mcm2 | MGP_PahariEiJ_P0054633 | MGP_PahariEiJ_P0051097 | Chromatin licensing and DNA replication factor 1. | DNA replication licensing factor MCM2 isoform X1. | 0.998 |
Cdt1 | Mcm3 | MGP_PahariEiJ_P0054633 | MGP_PahariEiJ_P0072228 | Chromatin licensing and DNA replication factor 1. | DNA replication licensing factor MCM3. | 0.998 |
Cdt1 | Mcm4 | MGP_PahariEiJ_P0054633 | MGP_PahariEiJ_P0027893 | Chromatin licensing and DNA replication factor 1. | DNA replication licensing factor MCM4. | 0.999 |
Cdt1 | Mcm5 | MGP_PahariEiJ_P0054633 | MGP_PahariEiJ_P0047909 | Chromatin licensing and DNA replication factor 1. | DNA replication licensing factor MCM5 isoform X1. | 0.999 |
Cdt1 | Mcm7 | MGP_PahariEiJ_P0054633 | MGP_PahariEiJ_P0059860 | Chromatin licensing and DNA replication factor 1. | DNA replication licensing factor MCM7. | 0.998 |
Cdt1 | Orc1 | MGP_PahariEiJ_P0054633 | MGP_PahariEiJ_P0078597 | Chromatin licensing and DNA replication factor 1. | Origin recognition complex subunit 1 isoform X1. | 0.999 |
Cdt1 | Orc3 | MGP_PahariEiJ_P0054633 | MGP_PahariEiJ_P0057372 | Chromatin licensing and DNA replication factor 1. | Origin recognition complex subunit 3 isoform X1. | 0.997 |
Cdt1 | Orc4 | MGP_PahariEiJ_P0054633 | MGP_PahariEiJ_P0062675 | Chromatin licensing and DNA replication factor 1. | Origin recognition complex subunit 4. | 0.998 |
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