Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Btg4 | Pabpn1l | MGP_PahariEiJ_P0023495 | MGP_PahariEiJ_P0054637 | Protein Tob/BTG. | PABPN1 like, cytoplasmic. | 0.574 |
Leo1 | MGP_PahariEiJ_P0020720 | MGP_PahariEiJ_P0024361 | MGP_PahariEiJ_P0020720 | RNA polymerase-associated protein LEO1 isoform X1. | annotation not available | 0.528 |
Leo1 | MGP_PahariEiJ_P0020721 | MGP_PahariEiJ_P0024361 | MGP_PahariEiJ_P0020721 | RNA polymerase-associated protein LEO1 isoform X1. | annotation not available | 0.528 |
Leo1 | Pabpn1l | MGP_PahariEiJ_P0024361 | MGP_PahariEiJ_P0054637 | RNA polymerase-associated protein LEO1 isoform X1. | PABPN1 like, cytoplasmic. | 0.559 |
Leo1 | Tra2a | MGP_PahariEiJ_P0024361 | MGP_PahariEiJ_P0049850 | RNA polymerase-associated protein LEO1 isoform X1. | Transformer-2 protein homolog alpha isoform X1. | 0.559 |
MGP_PahariEiJ_P0020720 | Leo1 | MGP_PahariEiJ_P0020720 | MGP_PahariEiJ_P0024361 | annotation not available | RNA polymerase-associated protein LEO1 isoform X1. | 0.528 |
MGP_PahariEiJ_P0020720 | MGP_PahariEiJ_P0020721 | MGP_PahariEiJ_P0020720 | MGP_PahariEiJ_P0020721 | annotation not available | annotation not available | 0.984 |
MGP_PahariEiJ_P0020720 | Pabpn1l | MGP_PahariEiJ_P0020720 | MGP_PahariEiJ_P0054637 | annotation not available | PABPN1 like, cytoplasmic. | 0.578 |
MGP_PahariEiJ_P0020720 | Tra2a | MGP_PahariEiJ_P0020720 | MGP_PahariEiJ_P0049850 | annotation not available | Transformer-2 protein homolog alpha isoform X1. | 0.578 |
MGP_PahariEiJ_P0020721 | Leo1 | MGP_PahariEiJ_P0020721 | MGP_PahariEiJ_P0024361 | annotation not available | RNA polymerase-associated protein LEO1 isoform X1. | 0.528 |
MGP_PahariEiJ_P0020721 | MGP_PahariEiJ_P0020720 | MGP_PahariEiJ_P0020721 | MGP_PahariEiJ_P0020720 | annotation not available | annotation not available | 0.984 |
MGP_PahariEiJ_P0020721 | Pabpn1l | MGP_PahariEiJ_P0020721 | MGP_PahariEiJ_P0054637 | annotation not available | PABPN1 like, cytoplasmic. | 0.578 |
MGP_PahariEiJ_P0020721 | Tra2a | MGP_PahariEiJ_P0020721 | MGP_PahariEiJ_P0049850 | annotation not available | Transformer-2 protein homolog alpha isoform X1. | 0.578 |
Pabpc1l | Pabpn1l | MGP_PahariEiJ_P0066985 | MGP_PahariEiJ_P0054637 | Polyadenylate-binding protein 1-like. | PABPN1 like, cytoplasmic. | 0.530 |
Pabpn1l | Btg4 | MGP_PahariEiJ_P0054637 | MGP_PahariEiJ_P0023495 | PABPN1 like, cytoplasmic. | Protein Tob/BTG. | 0.574 |
Pabpn1l | Leo1 | MGP_PahariEiJ_P0054637 | MGP_PahariEiJ_P0024361 | PABPN1 like, cytoplasmic. | RNA polymerase-associated protein LEO1 isoform X1. | 0.559 |
Pabpn1l | MGP_PahariEiJ_P0020720 | MGP_PahariEiJ_P0054637 | MGP_PahariEiJ_P0020720 | PABPN1 like, cytoplasmic. | annotation not available | 0.578 |
Pabpn1l | MGP_PahariEiJ_P0020721 | MGP_PahariEiJ_P0054637 | MGP_PahariEiJ_P0020721 | PABPN1 like, cytoplasmic. | annotation not available | 0.578 |
Pabpn1l | Pabpc1l | MGP_PahariEiJ_P0054637 | MGP_PahariEiJ_P0066985 | PABPN1 like, cytoplasmic. | Polyadenylate-binding protein 1-like. | 0.530 |
Pabpn1l | Pum1 | MGP_PahariEiJ_P0054637 | MGP_PahariEiJ_P0079835 | PABPN1 like, cytoplasmic. | Pumilio homolog 1 isoform X1. | 0.527 |
page 1 of 3