Cpne7 protein (Mus pahari) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Cpne7

Copine-7. (557 aa)

Predicted Functional Partners:

MGP_PahariEiJ_P0085170

0.591

Rnaseh2a

0.540

Spata33

0.495

Your Current Organism:

Mus pahari

NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cpne7	MGP_PahariEiJ_P0085170	MGP_PahariEiJ_P0054666	MGP_PahariEiJ_P0085170	Copine-7.	annotation not available	0.591
Cpne7	Rnaseh2a	MGP_PahariEiJ_P0054666	MGP_PahariEiJ_P0053607	Copine-7.	Ribonuclease H2 subunit A isoform X1.	0.540
Cpne7	Spata33	MGP_PahariEiJ_P0054666	MGP_PahariEiJ_P0054680	Copine-7.	Spermatogenesis-associated protein 33.	0.495
MGP_PahariEiJ_P0085170	Cpne7	MGP_PahariEiJ_P0085170	MGP_PahariEiJ_P0054666	annotation not available	Copine-7.	0.591
MGP_PahariEiJ_P0085170	Rnaseh2a	MGP_PahariEiJ_P0085170	MGP_PahariEiJ_P0053607	annotation not available	Ribonuclease H2 subunit A isoform X1.	0.999
Rnaseh2a	Cpne7	MGP_PahariEiJ_P0053607	MGP_PahariEiJ_P0054666	Ribonuclease H2 subunit A isoform X1.	Copine-7.	0.540
Rnaseh2a	MGP_PahariEiJ_P0085170	MGP_PahariEiJ_P0053607	MGP_PahariEiJ_P0085170	Ribonuclease H2 subunit A isoform X1.	annotation not available	0.999
Spata33	Cpne7	MGP_PahariEiJ_P0054680	MGP_PahariEiJ_P0054666	Spermatogenesis-associated protein 33.	Copine-7.	0.495