STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110337880Uncharacterized protein LOC110337880. (117 aa)    
Predicted Functional Partners:
Rint1
RAD50-interacting protein 1 isoform X1.
    
 0.697
Stx18
Syntaxin-18 isoform X1.
   
 0.680
Use1
Unconventional SNARE in the endoplasmic reticulum protein 1.
    
 0.673
Nbas
Neuroblastoma-amplified sequence isoform X1.
   
 0.604
Zw10
Centromere/kinetochore protein zw10 homolog.
    
 0.600
Creb1
Cyclic AMP-responsive element-binding protein 1 isoform X1.
   
 0.523
Sec22c
SEC22 vesicle trafficking protein A/C.
   
 0.518
Sec22a
Vesicle-trafficking protein SEC22a isoform X1.
   
 0.518
Sec22b
Vesicle-trafficking protein SEC22b.
   
 0.518
Rps6ka3
Ribosomal protein S6 kinase alpha-1/2/3/6.
    
  0.517
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.