STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AntkmtProtein FAM173A isoform X1. (229 aa)    
Predicted Functional Partners:
Smim26
Uncharacterized protein LOC110319547.
   
 
 0.577
Trmt112
Multifunctional methyltransferase subunit TRM112-like protein isoform X1.
   
 0.545
Oxld1
Oxidoreductase-like domain-containing protein 1 isoform X1.
   
 
 0.527
Tsr1
Pre-rRNA-processing protein TSR1 homolog.
   
 0.494
Bysl
Essential nuclear protein 1.
   
 0.492
Haghl
Hydroxyacylglutathione hydrolase-like protein.
 
 
 
 0.484
MGP_PahariEiJ_P0020720
annotation not available
   
  0.477
MGP_PahariEiJ_P0020721
annotation not available
   
  0.477
Ndufb10
NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 10.
   
 
 0.459
Rps3a1
Small subunit ribosomal protein S3Ae.
   
  0.458
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.