STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nkx2-5Homeobox protein Nkx-2.5. (318 aa)    
Predicted Functional Partners:
Mef2a
Myocyte enhancer factor 2A.
    
 
 0.985
Tbx5
T-box transcription factor TBX5.
   
 
 0.984
Gata4
Transcription factor GATA-4 isoform X1.
   
 0.983
Mef2c
Myocyte-specific enhancer factor 2C isoform X1.
    
 
 0.893
Gata5
Transcription factor GATA-5.
   
 0.860
Gata6
Transcription factor GATA-6.
   
 0.807
Hand2
Heart- and neural crest derivatives-expressed protein 2.
   
 
 0.805
Tbx20
T-box transcription factor TBX20 isoform X1.
   
 
 0.795
Nppa
Natriuretic peptides A.
   
 
 0.790
Smarca4
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4.
    
 
 0.778
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.