STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rpl10aLarge subunit ribosomal protein L10Ae. (217 aa)    
Predicted Functional Partners:
Rpl18
60S ribosomal protein L18 isoform X1.
   
 0.999
Rpl27a
Large subunit ribosomal protein L27Ae.
  
 0.999
Rpl4
Large subunit ribosomal protein L4e.
  
 0.999
Rpl14
Large subunit ribosomal protein L14e.
   
 0.999
Rpl5
Large subunit ribosomal protein L5e.
  
 0.999
Rpl26
Large subunit ribosomal protein L26e.
  
 0.999
Rpl23a
Large subunit ribosomal protein L23Ae.
  
 0.999
Rpl23
Large subunit ribosomal protein L23e.
  
 0.999
Rpl19
Ribosomal protein L19.
   
 0.999
Rpl8
Large subunit ribosomal protein L8e.
  
 0.999
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.