Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Efcab3 | Smlr1 | MGP_PahariEiJ_P0037185 | MGP_PahariEiJ_P0056599 | EF-hand calcium-binding domain-containing protein 3 isoform X1. | Small leucine-rich protein 1. | 0.587 |
Smlr1 | Efcab3 | MGP_PahariEiJ_P0056599 | MGP_PahariEiJ_P0037185 | Small leucine-rich protein 1. | EF-hand calcium-binding domain-containing protein 3 isoform X1. | 0.587 |
Smlr1 | Tsen54 | MGP_PahariEiJ_P0056599 | MGP_PahariEiJ_P0037726 | Small leucine-rich protein 1. | TRNA-splicing endonuclease subunit Sen54. | 0.502 |
Smlr1 | Zfp335 | MGP_PahariEiJ_P0056599 | MGP_PahariEiJ_P0067123 | Small leucine-rich protein 1. | Zinc finger protein 335 isoform X1. | 0.410 |
Tsen54 | Smlr1 | MGP_PahariEiJ_P0037726 | MGP_PahariEiJ_P0056599 | TRNA-splicing endonuclease subunit Sen54. | Small leucine-rich protein 1. | 0.502 |
Zfp335 | Smlr1 | MGP_PahariEiJ_P0067123 | MGP_PahariEiJ_P0056599 | Zinc finger protein 335 isoform X1. | Small leucine-rich protein 1. | 0.410 |