STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hddc2Putative hydrolases of HD superfamily. (199 aa)    
Predicted Functional Partners:
Nudt12
Peroxisomal NADH pyrophosphatase NUDT12 isoform X1.
    
  0.560
Mtap
S-methyl-5'-thioadenosine phosphorylase.
  
 
  0.560
Pnp
Purine nucleoside phosphorylase.
  
 
  0.560
Olfr1408
Olfactory receptor 10J1-like.
      
 0.556
Mettl5
Methyltransferase-like protein 5.
   
    0.535
Eef1b2
Elongation factor 1-beta.
   
  
 0.506
Smug1
Single-strand selective monofunctional uracil DNA glycosylase.
   
 
  0.487
Adat2
TRNA-specific adenosine deaminase 2.
   
 
  0.487
Adat3
Probable inactive tRNA-specific adenosine deaminase-like protein 3.
   
 
  0.487
Qrich1
Glutamine-rich protein 1.
    
  0.457
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.