STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrdnTriadin. (691 aa)    
Predicted Functional Partners:
Asph
Aspartyl/asparaginyl beta-hydroxylase isoform X1.
   
 0.997
Casq2
Calsequestrin-2 isoform X1.
   
 0.996
Ryr1
Ryanodine receptor 1.
   
 0.993
Casq1
Calsequestrin 1.
   
 0.988
Ryr2
Ryanodine receptor 2.
   
 0.981
Ryr3
Ryanodine receptor 3 isoform X1.
   
 0.980
Hrc
Sarcoplasmic reticulum histidine-rich calcium-binding protein.
   
 0.977
Jph2
Junctophilin-2.
   
 0.946
Jph1
Junctophilin-1.
   
 0.935
Jph3
Junctophilin-3.
   
 0.921
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.