Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cask | Sdc1 | MGP_PahariEiJ_P0088692 | MGP_PahariEiJ_P0082008 | Calcium/calmodulin-dependent serine protein kinase. | Syndecan-1 isoform X1. | 0.653 |
Cask | Sdcbp | MGP_PahariEiJ_P0088692 | MGP_PahariEiJ_P0057014 | Calcium/calmodulin-dependent serine protein kinase. | Syntenin-1 isoform X1. | 0.742 |
Cd63 | Cd81 | MGP_PahariEiJ_P0087465 | MGP_PahariEiJ_P0020215 | CD63 antigen. | CD81 antigen. | 0.823 |
Cd63 | Cd9 | MGP_PahariEiJ_P0087465 | MGP_PahariEiJ_P0052506 | CD63 antigen. | CD9 antigen. | 0.843 |
Cd63 | Egfr | MGP_PahariEiJ_P0087465 | MGP_PahariEiJ_P0030207 | CD63 antigen. | Epidermal growth factor receptor isoform X1. | 0.734 |
Cd63 | Pdcd6ip | MGP_PahariEiJ_P0087465 | MGP_PahariEiJ_P0026112 | CD63 antigen. | Programmed cell death 6-interacting protein isoform X1. | 0.705 |
Cd63 | Sdc1 | MGP_PahariEiJ_P0087465 | MGP_PahariEiJ_P0082008 | CD63 antigen. | Syndecan-1 isoform X1. | 0.477 |
Cd63 | Sdcbp | MGP_PahariEiJ_P0087465 | MGP_PahariEiJ_P0057014 | CD63 antigen. | Syntenin-1 isoform X1. | 0.850 |
Cd63 | Tsg101 | MGP_PahariEiJ_P0087465 | MGP_PahariEiJ_P0016593 | CD63 antigen. | Tumor susceptibility gene 101 protein isoform X1. | 0.940 |
Cd81 | Cd63 | MGP_PahariEiJ_P0020215 | MGP_PahariEiJ_P0087465 | CD81 antigen. | CD63 antigen. | 0.823 |
Cd81 | Cd9 | MGP_PahariEiJ_P0020215 | MGP_PahariEiJ_P0052506 | CD81 antigen. | CD9 antigen. | 0.914 |
Cd81 | Egfr | MGP_PahariEiJ_P0020215 | MGP_PahariEiJ_P0030207 | CD81 antigen. | Epidermal growth factor receptor isoform X1. | 0.671 |
Cd81 | Pdcd6ip | MGP_PahariEiJ_P0020215 | MGP_PahariEiJ_P0026112 | CD81 antigen. | Programmed cell death 6-interacting protein isoform X1. | 0.678 |
Cd81 | Sdcbp | MGP_PahariEiJ_P0020215 | MGP_PahariEiJ_P0057014 | CD81 antigen. | Syntenin-1 isoform X1. | 0.745 |
Cd81 | Tsg101 | MGP_PahariEiJ_P0020215 | MGP_PahariEiJ_P0016593 | CD81 antigen. | Tumor susceptibility gene 101 protein isoform X1. | 0.827 |
Cd9 | Cd63 | MGP_PahariEiJ_P0052506 | MGP_PahariEiJ_P0087465 | CD9 antigen. | CD63 antigen. | 0.843 |
Cd9 | Cd81 | MGP_PahariEiJ_P0052506 | MGP_PahariEiJ_P0020215 | CD9 antigen. | CD81 antigen. | 0.914 |
Cd9 | Egfr | MGP_PahariEiJ_P0052506 | MGP_PahariEiJ_P0030207 | CD9 antigen. | Epidermal growth factor receptor isoform X1. | 0.721 |
Cd9 | Pdcd6ip | MGP_PahariEiJ_P0052506 | MGP_PahariEiJ_P0026112 | CD9 antigen. | Programmed cell death 6-interacting protein isoform X1. | 0.679 |
Cd9 | Sdcbp | MGP_PahariEiJ_P0052506 | MGP_PahariEiJ_P0057014 | CD9 antigen. | Syntenin-1 isoform X1. | 0.744 |
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