Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Gcsh | Gldc | MGP_PahariEiJ_P0054401 | MGP_PahariEiJ_P0021517 | Glycine cleavage system H protein, mitochondrial. | Glycine dehydrogenase (decarboxylating), mitochondrial. | 0.999 |
Gcsh | Pdhb | MGP_PahariEiJ_P0054401 | MGP_PahariEiJ_P0083699 | Glycine cleavage system H protein, mitochondrial. | Pyruvate dehydrogenase E1 component subunit beta, mitochondrial isoform X1. | 0.724 |
Gcsh | Tmem41a | MGP_PahariEiJ_P0054401 | MGP_PahariEiJ_P0028404 | Glycine cleavage system H protein, mitochondrial. | Transmembrane protein 41A. | 0.502 |
Gcsh | Tmem64 | MGP_PahariEiJ_P0054401 | MGP_PahariEiJ_P0057176 | Glycine cleavage system H protein, mitochondrial. | Transmembrane protein 64 isoform X1. | 0.502 |
Gldc | Gcsh | MGP_PahariEiJ_P0021517 | MGP_PahariEiJ_P0054401 | Glycine dehydrogenase (decarboxylating), mitochondrial. | Glycine cleavage system H protein, mitochondrial. | 0.999 |
Gldc | Tmem41a | MGP_PahariEiJ_P0021517 | MGP_PahariEiJ_P0028404 | Glycine dehydrogenase (decarboxylating), mitochondrial. | Transmembrane protein 41A. | 0.496 |
Gldc | Tmem64 | MGP_PahariEiJ_P0021517 | MGP_PahariEiJ_P0057176 | Glycine dehydrogenase (decarboxylating), mitochondrial. | Transmembrane protein 64 isoform X1. | 0.496 |
Intu | Tmem64 | MGP_PahariEiJ_P0068418 | MGP_PahariEiJ_P0057176 | Protein inturned. | Transmembrane protein 64 isoform X1. | 0.425 |
Nadk | Tmem41a | MGP_PahariEiJ_P0081405 | MGP_PahariEiJ_P0028404 | NAD+ kinase. | Transmembrane protein 41A. | 0.511 |
Nadk | Tmem64 | MGP_PahariEiJ_P0081405 | MGP_PahariEiJ_P0057176 | NAD+ kinase. | Transmembrane protein 64 isoform X1. | 0.494 |
Pdhb | Gcsh | MGP_PahariEiJ_P0083699 | MGP_PahariEiJ_P0054401 | Pyruvate dehydrogenase E1 component subunit beta, mitochondrial isoform X1. | Glycine cleavage system H protein, mitochondrial. | 0.724 |
Pdhb | Tmem41a | MGP_PahariEiJ_P0083699 | MGP_PahariEiJ_P0028404 | Pyruvate dehydrogenase E1 component subunit beta, mitochondrial isoform X1. | Transmembrane protein 41A. | 0.492 |
Pdhb | Tmem64 | MGP_PahariEiJ_P0083699 | MGP_PahariEiJ_P0057176 | Pyruvate dehydrogenase E1 component subunit beta, mitochondrial isoform X1. | Transmembrane protein 64 isoform X1. | 0.415 |
Tmem41a | Gcsh | MGP_PahariEiJ_P0028404 | MGP_PahariEiJ_P0054401 | Transmembrane protein 41A. | Glycine cleavage system H protein, mitochondrial. | 0.502 |
Tmem41a | Gldc | MGP_PahariEiJ_P0028404 | MGP_PahariEiJ_P0021517 | Transmembrane protein 41A. | Glycine dehydrogenase (decarboxylating), mitochondrial. | 0.496 |
Tmem41a | Nadk | MGP_PahariEiJ_P0028404 | MGP_PahariEiJ_P0081405 | Transmembrane protein 41A. | NAD+ kinase. | 0.511 |
Tmem41a | Pdhb | MGP_PahariEiJ_P0028404 | MGP_PahariEiJ_P0083699 | Transmembrane protein 41A. | Pyruvate dehydrogenase E1 component subunit beta, mitochondrial isoform X1. | 0.492 |
Tmem41a | Tmem64 | MGP_PahariEiJ_P0028404 | MGP_PahariEiJ_P0057176 | Transmembrane protein 41A. | Transmembrane protein 64 isoform X1. | 0.452 |
Tmem64 | Gcsh | MGP_PahariEiJ_P0057176 | MGP_PahariEiJ_P0054401 | Transmembrane protein 64 isoform X1. | Glycine cleavage system H protein, mitochondrial. | 0.502 |
Tmem64 | Gldc | MGP_PahariEiJ_P0057176 | MGP_PahariEiJ_P0021517 | Transmembrane protein 64 isoform X1. | Glycine dehydrogenase (decarboxylating), mitochondrial. | 0.496 |
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