Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Fam221b | Fndc8 | MGP_PahariEiJ_P0057803 | MGP_PahariEiJ_P0035506 | Protein FAM221B. | Fibronectin type III domain-containing protein 8. | 0.419 |
Fam221b | Tmem202 | MGP_PahariEiJ_P0057803 | MGP_PahariEiJ_P0023795 | Protein FAM221B. | Transmembrane protein 202. | 0.561 |
Fam221b | Tmem8b | MGP_PahariEiJ_P0057803 | MGP_PahariEiJ_P0057806 | Protein FAM221B. | Transmembrane protein 8B isoform X1. | 0.412 |
Fndc8 | Fam221b | MGP_PahariEiJ_P0035506 | MGP_PahariEiJ_P0057803 | Fibronectin type III domain-containing protein 8. | Protein FAM221B. | 0.419 |
Fndc8 | Tmem202 | MGP_PahariEiJ_P0035506 | MGP_PahariEiJ_P0023795 | Fibronectin type III domain-containing protein 8. | Transmembrane protein 202. | 0.412 |
Tmem202 | Fam221b | MGP_PahariEiJ_P0023795 | MGP_PahariEiJ_P0057803 | Transmembrane protein 202. | Protein FAM221B. | 0.561 |
Tmem202 | Fndc8 | MGP_PahariEiJ_P0023795 | MGP_PahariEiJ_P0035506 | Transmembrane protein 202. | Fibronectin type III domain-containing protein 8. | 0.412 |
Tmem8b | Fam221b | MGP_PahariEiJ_P0057806 | MGP_PahariEiJ_P0057803 | Transmembrane protein 8B isoform X1. | Protein FAM221B. | 0.412 |