STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Galnt9Polypeptide N-acetylgalactosaminyltransferase 9 isoform X1. (604 aa)    
Predicted Functional Partners:
Gcnt1
Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase.
     
 0.918
St6galnac1
Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase (sialyltransferase 7A).
     
 0.915
B3gnt6
Acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase.
     
 0.906
C1galt1
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
   
 
 0.688
C1galt1c1
C1GALT1-specific chaperone 1.
     
 0.684
Ccdc8
Coiled-coil domain-containing protein 8.
      
 0.503
Tmco4
Transmembrane and coiled-coil domain-containing protein 4.
      
 0.495
Ecscr
Endothelial cell-specific chemotaxis regulator.
    
 
 0.470
Ccnb3
G2/mitotic-specific cyclin-B3.
      
 0.470
Kat6a
Histone acetyltransferase KAT6A isoform X1.
      
 0.468
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.