Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Bysl | Dcaf13 | MGP_PahariEiJ_P0044620 | MGP_PahariEiJ_P0041507 | Essential nuclear protein 1. | DDB1- and CUL4-associated factor 13. | 0.997 |
Bysl | Emg1 | MGP_PahariEiJ_P0044620 | MGP_PahariEiJ_P0052275 | Essential nuclear protein 1. | Ribosomal RNA small subunit methyltransferase NEP1 isoform X1. | 0.995 |
Bysl | Krr1 | MGP_PahariEiJ_P0044620 | MGP_PahariEiJ_P0087922 | Essential nuclear protein 1. | KRR1 small subunit processome component homolog. | 0.998 |
Bysl | Noc4l | MGP_PahariEiJ_P0044620 | MGP_PahariEiJ_P0057991 | Essential nuclear protein 1. | U3 small nucleolar RNA-associated protein 19. | 0.997 |
Bysl | Nop14 | MGP_PahariEiJ_P0044620 | MGP_PahariEiJ_P0030916 | Essential nuclear protein 1. | Nucleolar protein 14. | 0.998 |
Bysl | Pdcd11 | MGP_PahariEiJ_P0044620 | MGP_PahariEiJ_P0022032 | Essential nuclear protein 1. | RRNA biogenesis protein RRP5. | 0.998 |
Bysl | Utp3 | MGP_PahariEiJ_P0044620 | MGP_PahariEiJ_P0032129 | Essential nuclear protein 1. | U3 small nucleolar RNA-associated protein 3. | 0.998 |
Bysl | Utp4 | MGP_PahariEiJ_P0044620 | MGP_PahariEiJ_P0054167 | Essential nuclear protein 1. | U3 small nucleolar RNA-associated protein 4 homolog isoform X1. | 0.997 |
Bysl | Wdr36 | MGP_PahariEiJ_P0044620 | MGP_PahariEiJ_P0038846 | Essential nuclear protein 1. | U3 small nucleolar RNA-associated protein 21. | 0.998 |
Bysl | Wdr46 | MGP_PahariEiJ_P0044620 | MGP_PahariEiJ_P0043643 | Essential nuclear protein 1. | U3 small nucleolar RNA-associated protein 7. | 0.998 |
Dcaf13 | Bysl | MGP_PahariEiJ_P0041507 | MGP_PahariEiJ_P0044620 | DDB1- and CUL4-associated factor 13. | Essential nuclear protein 1. | 0.997 |
Dcaf13 | Emg1 | MGP_PahariEiJ_P0041507 | MGP_PahariEiJ_P0052275 | DDB1- and CUL4-associated factor 13. | Ribosomal RNA small subunit methyltransferase NEP1 isoform X1. | 0.992 |
Dcaf13 | Krr1 | MGP_PahariEiJ_P0041507 | MGP_PahariEiJ_P0087922 | DDB1- and CUL4-associated factor 13. | KRR1 small subunit processome component homolog. | 0.997 |
Dcaf13 | Noc4l | MGP_PahariEiJ_P0041507 | MGP_PahariEiJ_P0057991 | DDB1- and CUL4-associated factor 13. | U3 small nucleolar RNA-associated protein 19. | 0.998 |
Dcaf13 | Nop14 | MGP_PahariEiJ_P0041507 | MGP_PahariEiJ_P0030916 | DDB1- and CUL4-associated factor 13. | Nucleolar protein 14. | 0.992 |
Dcaf13 | Pdcd11 | MGP_PahariEiJ_P0041507 | MGP_PahariEiJ_P0022032 | DDB1- and CUL4-associated factor 13. | RRNA biogenesis protein RRP5. | 0.989 |
Dcaf13 | Utp3 | MGP_PahariEiJ_P0041507 | MGP_PahariEiJ_P0032129 | DDB1- and CUL4-associated factor 13. | U3 small nucleolar RNA-associated protein 3. | 0.995 |
Dcaf13 | Utp4 | MGP_PahariEiJ_P0041507 | MGP_PahariEiJ_P0054167 | DDB1- and CUL4-associated factor 13. | U3 small nucleolar RNA-associated protein 4 homolog isoform X1. | 0.996 |
Dcaf13 | Wdr36 | MGP_PahariEiJ_P0041507 | MGP_PahariEiJ_P0038846 | DDB1- and CUL4-associated factor 13. | U3 small nucleolar RNA-associated protein 21. | 0.995 |
Dcaf13 | Wdr46 | MGP_PahariEiJ_P0041507 | MGP_PahariEiJ_P0043643 | DDB1- and CUL4-associated factor 13. | U3 small nucleolar RNA-associated protein 7. | 0.998 |
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