STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sez6lSeizure 6-like protein isoform X1. (964 aa)    
Predicted Functional Partners:
Bace2
Beta-site APP-cleaving enzyme 2 (memapsin 1).
   
 0.519
Rnf222
RING finger protein 222.
      
 0.518
Asphd2
Aspartate beta-hydroxylase domain-containing protein 2.
 
 
  
 0.517
Srrd
SRR1-like protein.
      
 0.505
Myo18b
Unconventional myosin-XVIIIb.
    
 0.501
Gak
Cyclin-G-associated kinase isoform X1.
    
 0.442
Osbpl6
Oxysterol-binding protein-related protein 6 isoform X1.
    
 
 0.435
Galnt18
Polypeptide N-acetylgalactosaminyltransferase 18 isoform X1.
   
 0.427
Ap2m1
AP-2 complex subunit mu isoform X1.
    
  0.425
Fkbp4
Peptidyl-prolyl cis-trans isomerase FKBP4.
   
 
 0.416
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.