Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arhgef6 | Arhgef7 | MGP_PahariEiJ_P0089146 | MGP_PahariEiJ_P0046609 | Rho guanine nucleotide exchange factor 6 isoform X1. | Rho guanine nucleotide exchange factor 7 isoform X1. | 0.934 |
Arhgef6 | Cdc42 | MGP_PahariEiJ_P0089146 | MGP_PahariEiJ_P0080381 | Rho guanine nucleotide exchange factor 6 isoform X1. | Cell division control protein 42 homolog isoform X1. | 0.860 |
Arhgef6 | Git1 | MGP_PahariEiJ_P0089146 | MGP_PahariEiJ_P0035160 | Rho guanine nucleotide exchange factor 6 isoform X1. | G protein-coupled receptor kinase interactor 1. | 0.987 |
Arhgef6 | Git2 | MGP_PahariEiJ_P0089146 | MGP_PahariEiJ_P0058275 | Rho guanine nucleotide exchange factor 6 isoform X1. | G protein-coupled receptor kinase interactor 2. | 0.931 |
Arhgef6 | Itsn2 | MGP_PahariEiJ_P0089146 | MGP_PahariEiJ_P0081956 | Rho guanine nucleotide exchange factor 6 isoform X1. | Intersectin-2. | 0.849 |
Arhgef6 | Pak1 | MGP_PahariEiJ_P0089146 | MGP_PahariEiJ_P0017597 | Rho guanine nucleotide exchange factor 6 isoform X1. | Serine/threonine-protein kinase PAK 1. | 0.996 |
Arhgef6 | Pak3 | MGP_PahariEiJ_P0089146 | MGP_PahariEiJ_P0090526 | Rho guanine nucleotide exchange factor 6 isoform X1. | Serine/threonine-protein kinase PAK 3 isoform X1. | 0.989 |
Arhgef6 | Src | MGP_PahariEiJ_P0089146 | MGP_PahariEiJ_P0066760 | Rho guanine nucleotide exchange factor 6 isoform X1. | Proto-oncogene tyrosine-protein kinase Src isoform X1. | 0.406 |
Arhgef7 | Arhgef6 | MGP_PahariEiJ_P0046609 | MGP_PahariEiJ_P0089146 | Rho guanine nucleotide exchange factor 7 isoform X1. | Rho guanine nucleotide exchange factor 6 isoform X1. | 0.934 |
Arhgef7 | Cdc42 | MGP_PahariEiJ_P0046609 | MGP_PahariEiJ_P0080381 | Rho guanine nucleotide exchange factor 7 isoform X1. | Cell division control protein 42 homolog isoform X1. | 0.998 |
Arhgef7 | Git1 | MGP_PahariEiJ_P0046609 | MGP_PahariEiJ_P0035160 | Rho guanine nucleotide exchange factor 7 isoform X1. | G protein-coupled receptor kinase interactor 1. | 0.998 |
Arhgef7 | Git2 | MGP_PahariEiJ_P0046609 | MGP_PahariEiJ_P0058275 | Rho guanine nucleotide exchange factor 7 isoform X1. | G protein-coupled receptor kinase interactor 2. | 0.995 |
Arhgef7 | Grk4 | MGP_PahariEiJ_P0046609 | MGP_PahariEiJ_P0030919 | Rho guanine nucleotide exchange factor 7 isoform X1. | G protein-coupled receptor kinase 4. | 0.502 |
Arhgef7 | Itsn2 | MGP_PahariEiJ_P0046609 | MGP_PahariEiJ_P0081956 | Rho guanine nucleotide exchange factor 7 isoform X1. | Intersectin-2. | 0.849 |
Arhgef7 | Pak1 | MGP_PahariEiJ_P0046609 | MGP_PahariEiJ_P0017597 | Rho guanine nucleotide exchange factor 7 isoform X1. | Serine/threonine-protein kinase PAK 1. | 0.986 |
Arhgef7 | Pak3 | MGP_PahariEiJ_P0046609 | MGP_PahariEiJ_P0090526 | Rho guanine nucleotide exchange factor 7 isoform X1. | Serine/threonine-protein kinase PAK 3 isoform X1. | 0.999 |
Arhgef7 | Pxn | MGP_PahariEiJ_P0046609 | MGP_PahariEiJ_P0058389 | Rho guanine nucleotide exchange factor 7 isoform X1. | LOW QUALITY PROTEIN: paxillin. | 0.980 |
Arhgef7 | Src | MGP_PahariEiJ_P0046609 | MGP_PahariEiJ_P0066760 | Rho guanine nucleotide exchange factor 7 isoform X1. | Proto-oncogene tyrosine-protein kinase Src isoform X1. | 0.977 |
Cdc42 | Arhgef6 | MGP_PahariEiJ_P0080381 | MGP_PahariEiJ_P0089146 | Cell division control protein 42 homolog isoform X1. | Rho guanine nucleotide exchange factor 6 isoform X1. | 0.860 |
Cdc42 | Arhgef7 | MGP_PahariEiJ_P0080381 | MGP_PahariEiJ_P0046609 | Cell division control protein 42 homolog isoform X1. | Rho guanine nucleotide exchange factor 7 isoform X1. | 0.998 |
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