Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cbs | Flad1 | MGP_PahariEiJ_P0056152 | MGP_PahariEiJ_P0069638 | Cystathionine beta-synthase isoform X1. | FAD synthase isoform X1. | 0.756 |
Cbs | Papss1 | MGP_PahariEiJ_P0056152 | MGP_PahariEiJ_P0071481 | Cystathionine beta-synthase isoform X1. | Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1. | 0.799 |
Cbs | Por | MGP_PahariEiJ_P0056152 | MGP_PahariEiJ_P0059571 | Cystathionine beta-synthase isoform X1. | NADPH--cytochrome P450 reductase. | 0.742 |
Ciapin1 | Por | MGP_PahariEiJ_P0053861 | MGP_PahariEiJ_P0059571 | Anamorsin. | NADPH--cytochrome P450 reductase. | 0.739 |
Cyb5a | Cyp1a1 | MGP_PahariEiJ_P0039857 | MGP_PahariEiJ_P0023697 | Cytochrome b5 isoform X1. | Cytochrome P450 family 1 subfamily A polypeptide 1. | 0.581 |
Cyb5a | Por | MGP_PahariEiJ_P0039857 | MGP_PahariEiJ_P0059571 | Cytochrome b5 isoform X1. | NADPH--cytochrome P450 reductase. | 0.817 |
Cyb5b | Cyp1a1 | MGP_PahariEiJ_P0054188 | MGP_PahariEiJ_P0023697 | Cytochrome b5 type B. | Cytochrome P450 family 1 subfamily A polypeptide 1. | 0.579 |
Cyb5b | Por | MGP_PahariEiJ_P0054188 | MGP_PahariEiJ_P0059571 | Cytochrome b5 type B. | NADPH--cytochrome P450 reductase. | 0.817 |
Cyp1a1 | Cyb5a | MGP_PahariEiJ_P0023697 | MGP_PahariEiJ_P0039857 | Cytochrome P450 family 1 subfamily A polypeptide 1. | Cytochrome b5 isoform X1. | 0.581 |
Cyp1a1 | Cyb5b | MGP_PahariEiJ_P0023697 | MGP_PahariEiJ_P0054188 | Cytochrome P450 family 1 subfamily A polypeptide 1. | Cytochrome b5 type B. | 0.579 |
Cyp1a1 | Hmox1 | MGP_PahariEiJ_P0023697 | MGP_PahariEiJ_P0047906 | Cytochrome P450 family 1 subfamily A polypeptide 1. | Heme oxygenase 1. | 0.462 |
Cyp1a1 | Por | MGP_PahariEiJ_P0023697 | MGP_PahariEiJ_P0059571 | Cytochrome P450 family 1 subfamily A polypeptide 1. | NADPH--cytochrome P450 reductase. | 0.695 |
Fancc | Por | MGP_PahariEiJ_P0041313 | MGP_PahariEiJ_P0059571 | Fanconi anemia group C protein. | NADPH--cytochrome P450 reductase. | 0.750 |
Flad1 | Cbs | MGP_PahariEiJ_P0069638 | MGP_PahariEiJ_P0056152 | FAD synthase isoform X1. | Cystathionine beta-synthase isoform X1. | 0.756 |
Flad1 | Papss1 | MGP_PahariEiJ_P0069638 | MGP_PahariEiJ_P0071481 | FAD synthase isoform X1. | Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1. | 0.994 |
Flad1 | Por | MGP_PahariEiJ_P0069638 | MGP_PahariEiJ_P0059571 | FAD synthase isoform X1. | NADPH--cytochrome P450 reductase. | 0.784 |
Hmox1 | Cyp1a1 | MGP_PahariEiJ_P0047906 | MGP_PahariEiJ_P0023697 | Heme oxygenase 1. | Cytochrome P450 family 1 subfamily A polypeptide 1. | 0.462 |
Hmox1 | Hmox2 | MGP_PahariEiJ_P0047906 | MGP_PahariEiJ_P0027609 | Heme oxygenase 1. | Heme oxygenase 2 isoform X1. | 0.989 |
Hmox1 | Por | MGP_PahariEiJ_P0047906 | MGP_PahariEiJ_P0059571 | Heme oxygenase 1. | NADPH--cytochrome P450 reductase. | 0.985 |
Hmox2 | Hmox1 | MGP_PahariEiJ_P0027609 | MGP_PahariEiJ_P0047906 | Heme oxygenase 2 isoform X1. | Heme oxygenase 1. | 0.989 |
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