STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cnpy4Protein canopy homolog 4. (248 aa)    
Predicted Functional Partners:
Hsp90b1
Heat shock protein 90kDa beta.
    
 0.679
Cnpy2
Protein canopy homolog 2.
      
 0.589
Tlr4
Toll-like receptor 4.
    
 0.564
Unc93b1
Protein unc-93 homolog B1 isoform X1.
   
 
 0.524
Lrrc40
Leucine-rich repeat-containing protein 40 isoform X1.
    
 0.514
Cnpy1
Protein canopy homolog 1.
      
 0.505
Fam13b
Protein FAM13B.
      
 0.457
Trap1
Heat shock protein 75 kDa, mitochondrial isoform X1.
    
 0.426
MGP_PahariEiJ_P0044405
annotation not available
    
 0.426
Tsc1
Tuberous sclerosis 1.
    
 0.426
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.