STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pan3PAB-dependent poly(A)-specific ribonuclease subunit PAN3 isoform X1. (889 aa)    
Predicted Functional Partners:
Pan2
PAB-dependent poly(A)-specific ribonuclease subunit PAN2 isoform X1.
    
 0.999
Aen
Apoptosis-enhancing nuclease isoform X1.
    
 0.745
Isg20
Interferon stimulated exonuclease gene 20.
    
 0.745
Trex1
Three-prime repair exonuclease 1 isoform X1.
    
 0.745
MGP_PahariEiJ_P0025825
annotation not available
    
 0.745
Rexo4
RNA exonuclease 4.
    
 0.745
Isg20l2
Interferon-stimulated 20 kDa exonuclease-like 2.
    
 0.745
MGP_PahariEiJ_P0078100
annotation not available
    
 0.745
Rexo1
RNA exonuclease 1 homolog.
    
 0.745
MGP_PahariEiJ_P0087123
annotation not available
    
 0.745
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.