STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trdmt1TRNA (cytosine(38)-C(5))-methyltransferase. (415 aa)    
Predicted Functional Partners:
Nsun2
TRNA (cytosine(34)-C(5))-methyltransferase isoform X1.
   
  
 0.738
Nsun6
Putative methyltransferase NSUN6.
   
  
 0.719
Dnmt3l
DNA (cytosine-5)-methyltransferase 3-like.
      
 0.711
Hnrnpk
Heterogeneous nuclear ribonucleoprotein K isoform X1.
      
 0.688
Dnmt3a
DNA (cytosine-5)-methyltransferase 3A isoform X1.
      
 0.671
MGP_PahariEiJ_P0066324
annotation not available
      
 0.663
Nsun3
TRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial.
   
  
 0.655
Dnmt1
DNA (cytosine-5)-methyltransferase 1 isoform X1.
      
0.638
Nsun7
Putative methyltransferase NSUN7 isoform X1.
   
  
 0.614
Nsun5
Probable 28S rRNA (cytosine-C(5))-methyltransferase isoform X1.
   
  
 0.613
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.