STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cacna1bVoltage-dependent N-type calcium channel subunit alpha-1B isoform X1. (2333 aa)    
Predicted Functional Partners:
Cacna1a
Voltage-dependent P/Q-type calcium channel subunit alpha-1A isoform X1.
  
 
0.984
Stx1a
Syntaxin 1A.
   
 0.974
Cacna1e
Voltage-dependent R-type calcium channel subunit alpha-1E isoform X1.
  
 
0.973
Cacnb2
Voltage-dependent L-type calcium channel subunit beta-2 isoform X1.
   
 0.963
Cacnb3
Voltage-dependent L-type calcium channel subunit beta-3 isoform X1.
   
 0.962
Cacna2d2
Voltage-dependent calcium channel subunit alpha-2/delta-2 isoform X1.
   
 0.956
Cacnb1
Calcium voltage-gated channel auxiliary subunit beta 1.
   
 0.946
Unc79
Protein unc-79 homolog isoform X1.
   
 0.932
Cacnb4
Voltage-dependent L-type calcium channel subunit beta-4 isoform X1.
   
 0.923
Cacna2d1
Voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X1.
   
 0.918
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.