Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Dpy19l4 | Mex3d | MGP_PahariEiJ_P0057107 | MGP_PahariEiJ_P0087092 | Probable C-mannosyltransferase DPY19L4. | RNA-binding protein MEX3D isoform X1. | 0.418 |
Dpy19l4 | Tmem117 | MGP_PahariEiJ_P0057107 | MGP_PahariEiJ_P0042933 | Probable C-mannosyltransferase DPY19L4. | Transmembrane protein 117. | 0.420 |
Dpy19l4 | Tmem141 | MGP_PahariEiJ_P0057107 | MGP_PahariEiJ_P0061263 | Probable C-mannosyltransferase DPY19L4. | Transmembrane protein 141. | 0.420 |
Higd1b | Tmem141 | MGP_PahariEiJ_P0037030 | MGP_PahariEiJ_P0061263 | HIG1 domain family member 1B. | Transmembrane protein 141. | 0.420 |
Higd1b | Tmem14a | MGP_PahariEiJ_P0037030 | MGP_PahariEiJ_P0072242 | HIG1 domain family member 1B. | Transmembrane protein 14A. | 0.406 |
Lcn10 | Tmem141 | MGP_PahariEiJ_P0061281 | MGP_PahariEiJ_P0061263 | Epididymal-specific lipocalin-10. | Transmembrane protein 141. | 0.478 |
Mex3d | Dpy19l4 | MGP_PahariEiJ_P0087092 | MGP_PahariEiJ_P0057107 | RNA-binding protein MEX3D isoform X1. | Probable C-mannosyltransferase DPY19L4. | 0.418 |
Mex3d | Rimklb | MGP_PahariEiJ_P0087092 | MGP_PahariEiJ_P0052175 | RNA-binding protein MEX3D isoform X1. | Beta-citrylglutamate/N-acetylaspartylglutamate synthase. | 0.420 |
Mex3d | Tmem117 | MGP_PahariEiJ_P0087092 | MGP_PahariEiJ_P0042933 | RNA-binding protein MEX3D isoform X1. | Transmembrane protein 117. | 0.478 |
Mex3d | Tmem141 | MGP_PahariEiJ_P0087092 | MGP_PahariEiJ_P0061263 | RNA-binding protein MEX3D isoform X1. | Transmembrane protein 141. | 0.476 |
Pusl1 | Rsrc1 | MGP_PahariEiJ_P0081496 | MGP_PahariEiJ_P0068883 | TRNA pseudouridine synthase-like 1. | Serine/Arginine-related protein 53 isoform X1. | 0.480 |
Pusl1 | Tmem141 | MGP_PahariEiJ_P0081496 | MGP_PahariEiJ_P0061263 | TRNA pseudouridine synthase-like 1. | Transmembrane protein 141. | 0.478 |
Rimklb | Mex3d | MGP_PahariEiJ_P0052175 | MGP_PahariEiJ_P0087092 | Beta-citrylglutamate/N-acetylaspartylglutamate synthase. | RNA-binding protein MEX3D isoform X1. | 0.420 |
Rimklb | Tmem117 | MGP_PahariEiJ_P0052175 | MGP_PahariEiJ_P0042933 | Beta-citrylglutamate/N-acetylaspartylglutamate synthase. | Transmembrane protein 117. | 0.420 |
Rimklb | Tmem141 | MGP_PahariEiJ_P0052175 | MGP_PahariEiJ_P0061263 | Beta-citrylglutamate/N-acetylaspartylglutamate synthase. | Transmembrane protein 141. | 0.420 |
Rsrc1 | Pusl1 | MGP_PahariEiJ_P0068883 | MGP_PahariEiJ_P0081496 | Serine/Arginine-related protein 53 isoform X1. | TRNA pseudouridine synthase-like 1. | 0.480 |
Rsrc1 | Tmem141 | MGP_PahariEiJ_P0068883 | MGP_PahariEiJ_P0061263 | Serine/Arginine-related protein 53 isoform X1. | Transmembrane protein 141. | 0.430 |
Tmem117 | Dpy19l4 | MGP_PahariEiJ_P0042933 | MGP_PahariEiJ_P0057107 | Transmembrane protein 117. | Probable C-mannosyltransferase DPY19L4. | 0.420 |
Tmem117 | Mex3d | MGP_PahariEiJ_P0042933 | MGP_PahariEiJ_P0087092 | Transmembrane protein 117. | RNA-binding protein MEX3D isoform X1. | 0.478 |
Tmem117 | Rimklb | MGP_PahariEiJ_P0042933 | MGP_PahariEiJ_P0052175 | Transmembrane protein 117. | Beta-citrylglutamate/N-acetylaspartylglutamate synthase. | 0.420 |
page 1 of 2