Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Gata1 | Gata2 | MGP_PahariEiJ_P0088567 | MGP_PahariEiJ_P0051033 | Erythroid transcription factor. | Endothelial transcription factor GATA-2 isoform X1. | 0.790 |
Gata1 | Gfi1b | MGP_PahariEiJ_P0088567 | MGP_PahariEiJ_P0061596 | Erythroid transcription factor. | Growth factor independent 1. | 0.839 |
Gata1 | Hdac1 | MGP_PahariEiJ_P0088567 | MGP_PahariEiJ_P0079704 | Erythroid transcription factor. | Histone deacetylase 1/2. | 0.692 |
Gata1 | Itga2b | MGP_PahariEiJ_P0088567 | MGP_PahariEiJ_P0036987 | Erythroid transcription factor. | Integrin alpha-IIb. | 0.745 |
Gata1 | Lmo2 | MGP_PahariEiJ_P0088567 | MGP_PahariEiJ_P0064405 | Erythroid transcription factor. | Rhombotin-2 isoform X1. | 0.981 |
Gata1 | Lyl1 | MGP_PahariEiJ_P0088567 | MGP_PahariEiJ_P0053550 | Erythroid transcription factor. | Protein lyl-1. | 0.703 |
Gata1 | Spi1 | MGP_PahariEiJ_P0088567 | MGP_PahariEiJ_P0063994 | Erythroid transcription factor. | Transcription factor PU.1 isoform X1. | 0.843 |
Gata1 | Tal1 | MGP_PahariEiJ_P0088567 | MGP_PahariEiJ_P0078771 | Erythroid transcription factor. | T-cell acute lymphocytic leukemia protein 1. | 0.984 |
Gata2 | Gata1 | MGP_PahariEiJ_P0051033 | MGP_PahariEiJ_P0088567 | Endothelial transcription factor GATA-2 isoform X1. | Erythroid transcription factor. | 0.790 |
Gata2 | Gfi1b | MGP_PahariEiJ_P0051033 | MGP_PahariEiJ_P0061596 | Endothelial transcription factor GATA-2 isoform X1. | Growth factor independent 1. | 0.737 |
Gata2 | Hdac1 | MGP_PahariEiJ_P0051033 | MGP_PahariEiJ_P0079704 | Endothelial transcription factor GATA-2 isoform X1. | Histone deacetylase 1/2. | 0.495 |
Gata2 | Itga2b | MGP_PahariEiJ_P0051033 | MGP_PahariEiJ_P0036987 | Endothelial transcription factor GATA-2 isoform X1. | Integrin alpha-IIb. | 0.508 |
Gata2 | Lmo2 | MGP_PahariEiJ_P0051033 | MGP_PahariEiJ_P0064405 | Endothelial transcription factor GATA-2 isoform X1. | Rhombotin-2 isoform X1. | 0.912 |
Gata2 | Lyl1 | MGP_PahariEiJ_P0051033 | MGP_PahariEiJ_P0053550 | Endothelial transcription factor GATA-2 isoform X1. | Protein lyl-1. | 0.780 |
Gata2 | Spi1 | MGP_PahariEiJ_P0051033 | MGP_PahariEiJ_P0063994 | Endothelial transcription factor GATA-2 isoform X1. | Transcription factor PU.1 isoform X1. | 0.948 |
Gata2 | Tal1 | MGP_PahariEiJ_P0051033 | MGP_PahariEiJ_P0078771 | Endothelial transcription factor GATA-2 isoform X1. | T-cell acute lymphocytic leukemia protein 1. | 0.981 |
Gfi1b | Gata1 | MGP_PahariEiJ_P0061596 | MGP_PahariEiJ_P0088567 | Growth factor independent 1. | Erythroid transcription factor. | 0.839 |
Gfi1b | Gata2 | MGP_PahariEiJ_P0061596 | MGP_PahariEiJ_P0051033 | Growth factor independent 1. | Endothelial transcription factor GATA-2 isoform X1. | 0.737 |
Gfi1b | Hdac1 | MGP_PahariEiJ_P0061596 | MGP_PahariEiJ_P0079704 | Growth factor independent 1. | Histone deacetylase 1/2. | 0.718 |
Gfi1b | Itga2b | MGP_PahariEiJ_P0061596 | MGP_PahariEiJ_P0036987 | Growth factor independent 1. | Integrin alpha-IIb. | 0.639 |
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