STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CratCarnitine O-acetyltransferase isoform X1. (626 aa)    
Predicted Functional Partners:
Hsd17b4
Peroxisomal multifunctional enzyme type 2.
   
 0.839
Slc25a20
Solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29.
   
 
 0.812
Scp2
Sterol carrier protein 2, liver.
   
 0.781
MGP_PahariEiJ_P0083696
annotation not available
   
 0.724
Hsdl2
Hydroxysteroid dehydrogenase-like protein 2 isoform X1.
   
 0.721
Acox1
Peroxisomal acyl-coenzyme A oxidase 1 isoform X1.
   
 0.630
Pex5
Peroxisomal biogenesis factor 5 isoform X1.
    
 0.615
Pex5l
PEX5-related protein isoform X1.
    
 0.615
Acox2
3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl-CoA 24-hydroxylase.
   
 0.595
Pex14
Peroxisomal membrane protein PEX14.
    
 0.586
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.