STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nr5a1Steroidogenic factor 1 isoform X1. (462 aa)    
Predicted Functional Partners:
Nr0b1
Nuclear receptor subfamily 0 group B member 1.
    
 0.989
Nr0b2
Nuclear receptor subfamily 0 group B member 2.
   
 0.981
Ppargc1a
Alpha peroxisome proliferator-activated receptor gamma coactivator 1-alpha.
    
 
 0.977
Sox3
Transcription factor SOX1/3/14/21 (SOX group B).
    
 0.963
Sox9
Transcription factor SOX9 (SOX group E).
    
 0.960
Prkaca
CAMP-dependent protein kinase catalytic subunit alpha isoform X1.
     
 0.923
Prkacb
CAMP-dependent protein kinase catalytic subunit beta isoform X1.
     
 0.922
Wt1
Wilms tumor protein isoform X1.
   
 0.904
Gata4
Transcription factor GATA-4 isoform X1.
    
 0.903
Ncoa2
Nuclear receptor coactivator 2 isoform X1.
    
 0.869
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.