STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ddb2DNA damage-binding protein 2 isoform X1. (432 aa)    
Predicted Functional Partners:
Ddb1
DNA damage-binding protein 1.
    
 0.999
Cul4a
Cullin-4A.
    
 0.988
Ercc8
DNA excision repair protein ERCC-8.
    
0.983
Det1
De-etiolated-1.
     
 0.982
Trp53
Cellular tumor antigen p53 isoform X1.
   
 0.978
Rbx1
E3 ubiquitin-protein ligase RBX1.
    
 0.974
Usp24
Ubiquitin carboxyl-terminal hydrolase 9/24.
    
 0.967
Dtl
Denticleless protein homolog isoform X1.
   
 0.922
Dcaf1
DDB1- and CUL4-associated factor 1.
     
 0.892
Xpa
DNA repair protein complementing XP-A cells.
    
 0.878
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.