Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Abcd3 | Acbd5 | MGP_PahariEiJ_P0071184 | MGP_PahariEiJ_P0060914 | ATP-binding cassette sub-family D member 3 isoform X1. | Acyl-CoA-binding domain-containing protein 5. | 0.717 |
Abcd3 | Pex11a | MGP_PahariEiJ_P0071184 | MGP_PahariEiJ_P0017121 | ATP-binding cassette sub-family D member 3 isoform X1. | Peroxisomal membrane protein 11A isoform X1. | 0.776 |
Abcd3 | Pex11b | MGP_PahariEiJ_P0071184 | MGP_PahariEiJ_P0070301 | ATP-binding cassette sub-family D member 3 isoform X1. | Peroxisomal membrane protein 11B isoform X1. | 0.804 |
Abcd3 | Pex12 | MGP_PahariEiJ_P0071184 | MGP_PahariEiJ_P0035523 | ATP-binding cassette sub-family D member 3 isoform X1. | Peroxisome assembly protein 12. | 0.808 |
Abcd3 | Pex13 | MGP_PahariEiJ_P0071184 | MGP_PahariEiJ_P0030046 | ATP-binding cassette sub-family D member 3 isoform X1. | Peroxisome biogenesis factor 13. | 0.834 |
Abcd3 | Pex14 | MGP_PahariEiJ_P0071184 | MGP_PahariEiJ_P0080938 | ATP-binding cassette sub-family D member 3 isoform X1. | Peroxisomal membrane protein PEX14. | 0.813 |
Abcd3 | Pex16 | MGP_PahariEiJ_P0071184 | MGP_PahariEiJ_P0064177 | ATP-binding cassette sub-family D member 3 isoform X1. | Peroxisomal biogenesis factor 16. | 0.795 |
Abcd3 | Pex19 | MGP_PahariEiJ_P0071184 | MGP_PahariEiJ_P0076538 | ATP-binding cassette sub-family D member 3 isoform X1. | Peroxisomal biogenesis factor 19 isoform X1. | 0.926 |
Abcd3 | Pex3 | MGP_PahariEiJ_P0071184 | MGP_PahariEiJ_P0056396 | ATP-binding cassette sub-family D member 3 isoform X1. | Peroxisomal biogenesis factor 3 isoform X1. | 0.837 |
Abcd3 | Slc25a17 | MGP_PahariEiJ_P0071184 | MGP_PahariEiJ_P0042437 | ATP-binding cassette sub-family D member 3 isoform X1. | Solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17. | 0.785 |
Acbd5 | Abcd3 | MGP_PahariEiJ_P0060914 | MGP_PahariEiJ_P0071184 | Acyl-CoA-binding domain-containing protein 5. | ATP-binding cassette sub-family D member 3 isoform X1. | 0.717 |
Acbd5 | Pex11a | MGP_PahariEiJ_P0060914 | MGP_PahariEiJ_P0017121 | Acyl-CoA-binding domain-containing protein 5. | Peroxisomal membrane protein 11A isoform X1. | 0.623 |
Acbd5 | Pex11b | MGP_PahariEiJ_P0060914 | MGP_PahariEiJ_P0070301 | Acyl-CoA-binding domain-containing protein 5. | Peroxisomal membrane protein 11B isoform X1. | 0.681 |
Acbd5 | Pex12 | MGP_PahariEiJ_P0060914 | MGP_PahariEiJ_P0035523 | Acyl-CoA-binding domain-containing protein 5. | Peroxisome assembly protein 12. | 0.621 |
Acbd5 | Pex13 | MGP_PahariEiJ_P0060914 | MGP_PahariEiJ_P0030046 | Acyl-CoA-binding domain-containing protein 5. | Peroxisome biogenesis factor 13. | 0.671 |
Acbd5 | Pex14 | MGP_PahariEiJ_P0060914 | MGP_PahariEiJ_P0080938 | Acyl-CoA-binding domain-containing protein 5. | Peroxisomal membrane protein PEX14. | 0.697 |
Acbd5 | Pex16 | MGP_PahariEiJ_P0060914 | MGP_PahariEiJ_P0064177 | Acyl-CoA-binding domain-containing protein 5. | Peroxisomal biogenesis factor 16. | 0.805 |
Acbd5 | Pex19 | MGP_PahariEiJ_P0060914 | MGP_PahariEiJ_P0076538 | Acyl-CoA-binding domain-containing protein 5. | Peroxisomal biogenesis factor 19 isoform X1. | 0.708 |
Acbd5 | Pex3 | MGP_PahariEiJ_P0060914 | MGP_PahariEiJ_P0056396 | Acyl-CoA-binding domain-containing protein 5. | Peroxisomal biogenesis factor 3 isoform X1. | 0.644 |
Acbd5 | Slc25a17 | MGP_PahariEiJ_P0060914 | MGP_PahariEiJ_P0042437 | Acyl-CoA-binding domain-containing protein 5. | Solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17. | 0.603 |
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