STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ldlrad3Low-density lipoprotein receptor class A domain-containing protein 3. (345 aa)    
Predicted Functional Partners:
Itsn2
Intersectin-2.
    
 0.622
Itsn1
Intersectin-1 isoform X1.
    
 0.521
App
Amyloid beta precursor protein.
    
 0.513
Reln
Reelin isoform X1.
    
 0.490
Mxra8
Matrix remodeling-associated protein 8 isoform X1.
      
 0.439
Pcsk9
Proprotein convertase subtilisin/kexin type 9.
    
 0.436
Egflam
Pikachurin isoform X1.
    
 0.415
Appl1
DCC-interacting protein 13 alpha.
   
 0.413
Appl2
DCC-interacting protein 13-beta isoform X1.
   
 0.413
Sacm1l
Phosphatidylinositide phosphatase SAC1 isoform X1.
    
 0.412
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.