STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nat10RNA cytidine acetyltransferase. (1024 aa)    
Predicted Functional Partners:
Bms1
Ribosome biogenesis protein BMS1 homolog.
   
 0.999
Pwp2
Periodic tryptophan protein 2 homolog.
   
 0.999
Nop14
Nucleolar protein 14.
   
 0.998
Wdr36
U3 small nucleolar RNA-associated protein 21.
  
 0.998
Wdr46
U3 small nucleolar RNA-associated protein 7.
   
 0.998
Bysl
Essential nuclear protein 1.
   
 0.998
Nol6
U3 small nucleolar RNA-associated protein 22.
   
 0.998
Nop58
Nucleolar protein 58 isoform X1.
   
 0.998
Nol10
Ribosome biogenesis protein ENP2.
   
 0.998
Utp20
Small subunit processome component 20 homolog isoform X1.
   
 0.998
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.