STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Prrg4Transmembrane gamma-carboxyglutamic acid protein 4. (226 aa)    
Predicted Functional Partners:
Prr16
Protein Largen.
      
 0.420
Btbd1
BTB/POZ domain-containing protein 1 isoform X1.
      
 0.418
Dscc1
Sister chromatid cohesion protein DCC1.
      
 0.412
Tcp11l1
T-complex protein 11-like protein 1.
      
 0.412
Rab3gap2
Rab3 GTPase-activating protein non-catalytic subunit isoform X1.
      
 0.410
Ap3b2
AP-3 complex subunit beta-2 isoform X1.
      
 0.408
Irf6
Interferon regulatory factor 6.
      
 0.408
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.